Resource Centre
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ZiBRA project: real-time sequencing of Zika virus in Brazil
- Scalable
- Microbiology
- Real-time
- Targeted
- Biodefence
- Infectious disease
March 30 2016
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Using MinION to characterize dog skin microbiota through full-length 16S rRNA gene sequencing approach
- Scalable
- MinION
- 16S
- Microbiome
- Microbiology
- Infectious disease
July 21 2017
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On site DNA barcoding by nanopore sequencing
- Scalable
- Portable
- MinION
- Environment
- Identification
- Real-time
October 23 2017
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Serotyping dengue virus with isothermal amplification and a portable sequencer
- Scalable
- Microbiology
- Biodefence
- RNA
- cDNA
- MinION
June 14 2017
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Sequencing the gigabase plant genome of the wild tomato species Solanum pennellii using Oxford Nanopore single molecule sequencing
- Scalable
- MinION
- Whole genome
- Plant
- Long-read
- Portable
December 13 2016
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Selective single molecule sequencing and assembly of a human Y chromosome of African origin
- Scalable
- Human genomics
- Assembly
- Long-read
- Portable
- Epigenetics
January 2 2019
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Selection of Potential Therapeutic Bacteriophages that Lyse a CTX-M-15 Extended Spectrum β-Lactamase Producing Salmonella enterica Serovar Typhi Strain from the Democratic Republic of the Congo
- Scalable
- Microbiology
- Infectious disease
- Long-read
- MinION
- Portable
April 3 2018
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Scywalker: scalable end-to-end data analysis workflow for long-read single-cell transcriptome sequencing
- Scalable
- Single cell
- Transcriptome
- Transcriptomics
- Workflow
- Long-read
September 10 2024
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Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches
- Scalable
- MinION
- Microbiology
- Infectious disease
- Long-read
- Portable
June 9 2017
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Real time portable genome sequencing for global food security
- Scalable
- Microbiology
- Infectious disease
- Plant
- Long-read
- Portable
July 18 2018
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Real-time, portable genome sequencing for Ebola surveillance.
- Scalable
- Microbiology
- Real-time
- Infectious disease
- Biodefence
- Portable
February 20 2016
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Real-time DNA barcoding in a remote rainforest using nanopore sequencing
- Scalable
- Environment
- DNA
- MinION
- Long-read
- Exome
September 15 2017
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Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices
- Scalable
- Metagenomics
- Clinical research
- Infectious disease
- Microbiology
- Long-read
September 27 2018
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Rapid short-read sequencing and aneuploidy detection using MinION nanopore technology
- Scalable
- Clinical research
- Real-time
- WIMP
- Reproductive medicine
- Targeted
February 16 2016
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Rapid preimplantation genetic screening (PGS) using a handheld, nanopore-based, DNA sequencer
- Scalable
- MinION
- Human genomics
- Clinical research
- Long-read
- Portable
March 1 2018
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Rapid low-cost assembly of the Drosophila melanogaster reference genome using low-coverage, long-read sequencing
- Scalable
- Assembly
- Long-read
- MinION
- Portable
- Structural variation
July 17 2018
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Rapid genome sequencing for outbreak analysis of the emerging human fungal pathogen Candida auris
- Scalable
- Infectious disease
- Microbiology
- Biodefence
- Portable
- Long-read
October 13 2017
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Rapid and Accurate Sequencing of Enterovirus Genomes Using MinION Nanopore Sequencer.
- Scalable
- Clinical research
- MinION
- Infectious disease
- Microbiology
- Long-read
October 30 2017
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Rapid and accurate demultiplexing of direct RNA nanopore sequencing datasets with SeqTagger
- Scalable
- Bioinformatics
- RNA
- MinION
- PromethION
January 29 2025
Quasi-metagenomics and realtime sequencing aided detection and subtyping of Salmonella enterica from food samples
- Scalable
- Microbiology
- Food safety
- Portable
- MinION
- Industrial diagnostics
January 1 2018