Resource Centre
Publication 
Yaniv Erlich: A vision for Ubiquitous Sequencing
Workflow 
Workflow overview: mpox virus sequencing
Publication 
Whole-genome nanopore sequencing and automatic downstream analysis of respiratory syncytial virus using RSVTyper
Publication 
Tree Lab: Portable genomics for early detection of plant viruses and pests in Sub-Saharan Africa
Bioinformatics tool 
Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
Poster 
Targeted long-read sequencing for genetic diversity identification of the zoonotic Cryptosporidium sp.
Video 
Seq&Treat: targeted sequencing for drug-resistant TB detection and treatment
Publication 
Sensitive poliovirus detection using nested PCR and nanopore sequencing: a prospective validation study
Bioinformatics tool 
SARS-CoV-2 RECoVERY: a multi-platform open-source bioinformatic pipeline for the automatic construction and analysis of SARS-CoV-2 genomes from NGS sequencing data
Publication 
Resolving a neonatal intensive care unit outbreak of methicillin-resistant Staphylococcus aureus to the SNV level using Oxford Nanopore simplex reads
Publication 
Real-time, portable genome sequencing for Ebola surveillance.
Bioinformatics tool 
Real-time monitoring and analysis of SARS-CoV-2 nanopore sequencing with minoTour
Poster 
Rapid and sensitive direct detection and identification of poliovirus using nanopore sequencing
Bioinformatics tool 
periscope: sub-genomic RNA identification in SARS-CoV-2 ARTIC network nanopore sequencing data
Publication 
Ongoing mpox outbreak in Kamituga, South Kivu province, associated with monkeypox virus of a novel Clade I sub-lineage, Democratic Republic of the Con
Publication 
A novel Coronavirus from patients with pneumonia in China, 2019
Publication 
Molecular diagnosis of patients with hepatitis A virus infection using amplicon-based nanopore sequencing
Publication 
MinION nanopore sequencing of an influenza genome
Publication 
Metagenomic sequencing at the epicenter of the Nigeria 2018 Lassa fever outbreak
Poster 
Metagenomic approaches for arbovirus surveillance in Brazil
