Resource Centre
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Workflow overview: single-cell transcriptomics
- Single cell
- Transcriptome
- PromethION 24/48
- Cancer research
- Clinical research
- cDNA
February 24 2025
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Integrating 10x Genomics single-cell and spatial profiling with Oxford Nanopore long-read sequencing
- Single cell
- Webinar
- Human genomics
January 19 2024
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Core lab webinar series: New dimensions of biology revealed by full-length sequencing of single-cell and spatial assays
- Single cell
- Long-read
- PromethION
- cDNA
July 3 2023
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Using long-read sequencing for translational health research
- Single cell
- Single cell
- PromethION 2
- Bioinformatics
- Clinical research
- Population genomics
May 19 2025
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Untangling heterogeneity in DNA replication with nanopore sequencing
- Single cell
- London Calling
- Epigenetics
- Raw data
- Basecalling
- Whole genome
May 29 2019
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Uncovering RNA splicing’s cell-specific impact on clonal blood disorders with GoT-Splice
- Single cell
- Human genomics
- Transcriptome
April 8 2024
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Case study: ultra-rich nanopore data offers unprecedented insights into the transcriptomes of single cells
- Single cell
- RNA
- cDNA
- Human genomics
- Clinical research
- Transcriptome
January 17 2024
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Transposable element expression at unique loci in single cells with CELLO-seq
- Single cell
- Transcriptome
- Long-read
- Human genomics
- RNA
- cDNA
October 2 2020
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Taking your single-cell sequencing to new lengths with Oxford Nanopore
- Single cell
- Knowledge exchange
March 27 2024
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Systematic characterisation of full-length RNA isoforms in human colorectal cancer at single-cell resolution
- Single cell
- RNA
- Cancer research
- Isoforms
July 22 2025
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A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain
- Single cell
- Transcriptome
- PromethION
- Gene expression
- Isoforms
- Long-read
January 19 2021
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Spatial isoform sequencing at sub-micrometer single-cell resolution reveals novel patterns of spatial isoform variability in brain cell types
- Single cell
- Transcriptomics
- cDNA
June 25 2025
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A single fiber view of the nucleosome organization in eukaryotic chromatin
- Single cell
- MinION
- Structural variation
- Methylation
November 22 2023
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Single-cell transcriptomics with full-length cDNA sequencing provides unique insights into cellular diversity
- Single cell
- Cancer research
- London Calling
May 20 2025
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Single cell transcriptome sequencing on the Nanopore platform with ScNapBar
- Single cell
- GridION
- Long-read
- Human genomics
- Transcriptome
- Isoforms
October 16 2020
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Single-cell transcriptome sequencing
- Single cell
- Single cell
- PromethION 2
- EPI2ME
- Transcriptomics
- Human genomics
May 19 2025
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Single-cell third-generation sequencing-based multi-omics uncovers gene expression changes governed by ecDNA and structural variants in cancer cells
- Single cell
- Structural variation
- PromethION
- Variant calling
- Cancer research
- Transcriptome
July 30 2023
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Single-cell rapid capture hybridization sequencing (scRaCH-seq) to reliably detect isoform usage and coding mutations in targeted genes at a single-cell level
- Single cell
- Cancer research
- Transcriptome
- Isoforms
January 30 2024
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Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterisation of gene expression through long-read single-cell RNA seq
- Single cell
- Bioinformatics
- Transcriptomics
April 30 2024
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Single-cell multiomics reveal the scale of multi-layered adaptations enabling CLL relapse during venetoclax therapy
- Single cell
- Transcriptome
- Cancer research
- Human genomics
- RNA
- cDNA
June 16 2022
