Oxford Nanopore User Group Meeting, NYC
Overview
Emerging Applications
Join us to hear local researchers showcase their work with Oxford Nanopore sequencing and explore emerging applications in clinical research. The agenda also includes technical updates from the Oxford Nanopore team, live Q&A with presenters, hands-on device demonstrations, and a networking reception for registered attendees.
Date: Wednesday, October 14, 2026
Time: 12:30 pm–6:00 pm EDT
- Check-in and lunch: 12:30 pm–1:30 pm
- Talks: 1:30 pm–5:00 pm
- Networking reception: 5:00 pm–6:00 pm
Location: New York Genome Center
Space is limited! Please register early to secure your spot.
Agenda
12:30 pm–06:00 pm EDT | Agenda (subject to change) | Speaker |
|---|---|---|
12:30 pm–01:30 pm | Check-In/Lunch | |
01:30 pm–01:35 pm | Welcome | Karin Swenson, Oxford Nanopore Technologies |
01:35 pm–02:00 pm | Enabling clinical insights with ultra-rich Nanopore sequencing | Joe Marino, Oxford Nanopore Technologies |
02:00 pm–02:30 pm | Rapid diagnostics of pediatric cancers using long-read sequencing technology | Derek Wong, PhD, Children's Hospital of Philadelphia Feng Xu, PhD, Children's Hospital of Philadelphia |
02:30 pm–03:00 pm | Rapid whole genome multiomic clinical profiling of acute myeloid leukemia by long read sequencing | Lauren M. Wainman, PhD, Dartmouth Hitchcock Medical Center |
03:00 pm–03:30 pm | Networking Break | |
03:30 pm–04:00 pm | Targeted next generation sequencing of mycobacterium tuberculosis for the rapid prediction of drug resistance in a public health laboratory | Joseph Shea, Wadsworth Center, NYSDOH |
04:00 pm–04:30 pm | Implementation of Oxford Nanopore Sequencing for integrated, cost-effective cytogenomic testing | Joseph Tripodi, PhD, Icahn School of Medicine, Mount Sinai |
04:30 pm–05:00 pm | Panel Discussion: Enabling precision medicine with long read sequencing | All Oxford Nanopore guest speakers |
05:00 pm–05:05 pm | Closing | Kendra Vance, Oxford Nanopore Technologies |
05:05 pm–06:00 pm | Networking Reception |
Speakers
Karin Swenson, Director of Regional Sales Northeast, Oxford Nanopore Technologies
Joe Marino, Oxford Nanopore Technologies
Derek Wong, PhD, Children's Hospital of Philadelphia
Feng Xu, PhD, Children's Hospital of Philadelphia
Lauren M. Wainman, PhD, Dartmouth Hitchcock Medical CenterLauren currently supervises the Cytogenetics Laboratory and is involved in R&D in the Laboratory of Clinical Genomics and Advanced Technology CGAT at Dartmouth-Hitchcock Medical Center. In her current position, she is active in overseeing the clinical testing in the cytogenetics laboratory. Lauren’s research interests center around hematology and clinical implementation of long read sequencing technology. Lauren obtained her PhD in Molecular and Cell Biology from University of Connecticut in 2022 where she applied nascent RNA sequencing methods to examine enhancer function in hematological diseases. She subsequently completed the Molecular Diagnostics Fellowship at Dartmouth-Hitchcock Medical Center in 2024.
Joseph Shea , Wadworth Center, NYSDOHoseph Shea is a research scientist in the Mycobacteriology Laboratory at the Wadsworth Center, New York State Department of Health. After working in a food manufacturing lab, Joseph began working with tuberculosis while completing a master’s degree in lab sciences to pursue a career in public health. His research interests include antimicrobial resistance and molecular epidemiology of M. tuberculosis complex and zoonotic tuberculosis.
Joseph Tripodi, PhD, Icahn School of Medicine, Mount SinaiJoseph M. Tripodi, Ph.D., is Assistant Professor and Associate Director of the Tumor Cytogenomics Laboratory at the Icahn School of Medicine at Mount Sinai. A clinical cytogeneticist specializing in hematologic malignancies, he directs karyotyping, FISH, and microarray testing and is evaluating Oxford Nanopore long-read sequencing as a unified next-generation cytogenomic assay.
Derek Wong, PhD, Children's Hospital of PhiladelphiaI am an Assistant Professor at the University of Pennsylvania and board certified Laboratory Director in the Genomic Diagnostics Laboratory and Center for Diagnostic Innovation at the Children's Hospital of Philadelphia. There, I lead the development and validation of new technologies and assays for cancer genomics.
Feng Xu, PhD, Children's Hospital of PhiladelphiaFeng Xu, PhD, is a clinical genomics scientist at Children’s Hospital of Philadelphia. Her work focuses on the development and clinical translation of emerging molecular technologies for cancer genomic diagnostics and precision medicine.
Lauren M. Wainman, PhD Wainman, PhD, Dartmouth Hitchcock Medical CenterLauren currently supervises the Cytogenetics Laboratory and is involved in R&D in the Laboratory of Clinical Genomics and Advanced Technology CGAT at Dartmouth-Hitchcock Medical Center. In her current position, she is active in overseeing the clinical testing in the cytogenetics laboratory. Lauren’s research interests center around hematology and clinical implementation of long read sequencing technology. Lauren obtained her PhD in Molecular and Cell Biology from University of Connecticut in 2022 where she applied nascent RNA sequencing methods to examine enhancer function in hematological diseases. She subsequently completed the Molecular Diagnostics Fellowship at Dartmouth-Hitchcock Medical Center in 2024.
Joseph Tripodi, PhD, Icahn School of Medicine, Mount SinaiJoseph M. Tripodi, Ph.D., is Assistant Professor and Associate Director of the Tumor Cytogenomics Laboratory at the Icahn School of Medicine at Mount Sinai. A clinical cytogeneticist specializing in hematologic malignancies, he directs karyotyping, FISH, and microarray testing and is evaluating Oxford Nanopore long-read sequencing as a unified next-generation cytogenomic assay.
Joseph Shea , Wadworth Center, NYSDOHoseph Shea is a research scientist in the Mycobacteriology Laboratory at the Wadsworth Center, New York State Department of Health. After working in a food manufacturing lab, Joseph began working with tuberculosis while completing a master’s degree in lab sciences to pursue a career in public health. His research interests include antimicrobial resistance and molecular epidemiology of M. tuberculosis complex and zoonotic tuberculosis.
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