Resource Centre
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yacrd and fpa: upstream tools for long-read genome assembly
- Basecalling
- Long-read
- Assembly
- Alignment
- Bioinformatics
March 2 2020
)
Untangling heterogeneity in DNA replication with nanopore sequencing
- Basecalling
- London Calling
- Epigenetics
- Raw data
- Whole genome
- Single cell
May 29 2019
)
)
A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer
- Basecalling
- MinION
- Microbiology
- Alignment
- gDNA
- DNA
June 4 2016
)
Predictive power of long-read whole-genome sequencing for rapid diagnostics of multidrug-resistant Brachyspira hyodysenteriae strains
- Basecalling
- Microbiology
- Infectious disease
- Agriculture: animal
- Long-read
- Assembly
January 5 2023
)
poRe: an R package for the visualization and analysis of nanopore sequencing data
- Basecalling
- Bioinformatics
- MinION
- Raw data
January 12 2015
)
Picopore: A tool for reducing the size of Oxford Nanopore Technologies' datasets without losing information.
- Basecalling
- MinION
- Bioinformatics
- Raw data
February 14 2017
)
Performance of neural network basecalling tools for Oxford Nanopore sequencing
- Basecalling
- Raw data
- Assembly
June 24 2019
)
NCM 2024 technology update
- Basecalling
- Nanopore Community Meeting
- Bioinformatics
- Methylation
- Transcriptomics
- Whole genome
September 16 2024
)
Native molecule sequencing by nano-ID reveals synthesis and stability of RNA isoforms
- Basecalling
- RNA
- Direct analysis
- MinION
- Long-read
- Raw data
April 7 2019
)
NanoReviser: an error-correction tool for Nanopore sequencing based on a deep learning algorithm
- Basecalling
- Bioinformatics
- Raw data
- Long-read
- Epigenetics
- Methylation
August 12 2020
)
Nanopore sequencing: review of potential applications in functional genomics
- Basecalling
- Long-read
- Portable
- DNA
- RNA
- MinION
April 29 2019
)
NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data
- Basecalling
- Epigenetics
- Methylation
- Direct analysis
- Raw data
- Bioinformatics
February 4 2019
)
NanoDJ: a Dockerized Jupyter notebook for interactive Oxford Nanopore MinION sequence manipulation and genome assembly
- Basecalling
- Assembly
- Raw data
- Bioinformatics
May 9 2019
)
minoTour - A real time LIMS platform for Oxford Nanopore data
- Basecalling
- MinION
- GridION
- Real-time
- Metagenomics
June 19 2020
)
MinION Analysis and Reference Consortium: Phase 1 data release and analysis
- Basecalling
- Long-read
- Real-time
- MinION
- gDNA
- Whole genome
February 7 2015
)
Machine Boss: rapid prototyping of bioinformatic automata
- Basecalling
- Bioinformatics
- Alignment
- Microbiology
February 14 2020
)
London Calling 2024 technology update
- Basecalling
- Adaptive sampling
- Assembly
- Automation
- Bioinformatics
- Cancer research
May 24 2024
Impact of lossy compression of nanopore raw signal data on basecall and consensus accuracy
- Basecalling
- Raw data
April 20 2020
)
High quality genome assemblies of Mycoplasma bovis using a taxon-specific Bonito basecaller for MinION and Flongle long-read nanopore sequencing
- Basecalling
- Microbiology
- Whole genome
- Assembly
- Long-read
- MinION
November 11 2020