Obtaining full-length isoforms from single cells with Oxford Nanopore sequencing
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- Published on: February 24 2025
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Characterisation of transcriptomic differences between individual single cells, or spatially across tissues, has provided insight into the mechanisms of cell type-specific diseases, such as neurological disorders and cancer. With nanopore technology, characterise isoform-level expression from full-length cDNAs at the throughput needed to analyse thousands of cells.
This end-to-end workflow overview provides a simple solution for single-cell transcriptome analysis from 10x Genomics cDNA with library preparation in approximately three hours.
In this workflow overview, you will:
- Find out how full-length cDNA sequencing enhances single-cell transcriptome analysis
- Discover our best practice sequencing workflow in detail, starting from the recommended extraction method, through to primary analysis
- Learn about our recommended sequencing kit and devices
