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EPI2ME

EPI2ME

Data analysis for all levels of expertise.
EPI2ME enables anyone to analyse their own data.

EPI2ME: an open-analysis platform

  • Suitable for all experience levels via an intuitive desktop app or command line
  • Utilise preconfigured workflows for a wide range of applications
  • Analyse your data anywhere, whether on a laptop, cluster, cloud environment, or Oxford Nanopore device
  • Access results immediately with real-time analysis workflows
  • Build custom workflows and share via the EPI2ME application
Screenshots of the EPI2ME software

One platform — comprehensive analysis

Access a growing range of best practice analysis workflows — available through an intuitive desktop application or via the command line

Human genetics

Assembly

Metagenomics

Direct RNA sequencing and cDNA

Infectious disease

Targeted sequencing

Carlos Goller
“I love EPI2ME and the ability to copy the results folder and share everything from parameters to HTML reports.”

Carlos Goller, North Carolina State University,

Chao Chun Liu
"EPI2ME’s strategic integration of Nextflow enables seamless cross-platform delivery of scalable and reproducible bioinformatics tools in a format accessible to users at all levels of proficiency."

Chao Chun Liu, Simon Fraser University, Canada,

Andre Holzer
"The open-source EPI2ME platform enhances global access to best-practice analysis workflows, irrespective of bioinformatics expertise. It allows us to deploy, community-standardised software solutions, tailored to the needs of our research projects."

Andre Holzer, Holzer Scientific Consulting, Germany,

EPI2ME software displayed on a screen next to a GridION

Comprehensive resources

Discover how to analyse your data quickly and efficiently with our detailed support information.

Datasets

Short informative articles on how to make the most of your EPI2ME analyses.

Analysis articles

The latest news, events, and discussion from our bioinformatics experts.

Getting started

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