NCM Boston | Oxford Nanopore Technologies
NCM Boston
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Andreas CzechBioNTech, Germany
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Alex KneubehlBaylor College of Medicine, USA
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Anne-Sophie LebreCHU Reims, France
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Ailsa MacCalmanUniversity of Exeter, UK
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Anastasia McKinlayIndiana University & HHMI, USA
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Amit MathurSanofi, USA
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Ana PeresThe University of North Carolina at Chapel Hill, USA
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Aaron VinyColumbia University Irving Medical Center, USA
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Akelia Wauchope-OdumboAssociate Director, Technical Applications — Americas, Oxford Nanopore Technologies
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Bronya BoydonMachine Learning Bioinformatician, Oxford Nanopore Technologies
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Bradley HallAsuragen, USA
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Bryan LelandBioinformatics Manager, Commercial Applications, Oxford Nanopore Technologies
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Benjamin C. ReinerUniversity of Pennsylvania, USA
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Brynja SigurpálsdóttirdeCODE genetics, Iceland
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Cory BernhardsDEVCOM Chemical Biological Center, USA
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Chris BrownVP Strategic Programmes, Oxford Nanopore Technologies
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Colette CôtéPathoQuest, USA
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Christian GallardoSeattle Children's Research Institute, USA
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Carol GreiderUniversity of California, Santa Cruz, USA
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Chun-Chieh LinDartmouth Health, USA
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Chad PollardWasatch BioLabs, USA
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Charles A. SwoffordMIT Center for Biomedical Innovation, USA
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Carly TyerApplications Scientist, Oxford Nanopore Technologies
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Carika WeldonCariGenetics, Bermuda
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Daniel K. FabianLonza, UK
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Dan FordhamDirector, Strategic Product Management EMEA, Oxford Nanopore Technologies
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Daniel KimUniversity of California, Santa Cruz, USA
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Dmitrijs RotsErasmus MC, Netherlands
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David VanHouteRegeneron Pharmaceuticals, USA
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David YarmoshATCC, USA
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Gabriela PozoUniversity of San Francisco de Quito, Ecuador
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Gordon SangheraCEO, Oxford Nanopore Technologies
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Gaston VondenhoffLonza, The Netherlands
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Heather CarletonCenters for Disease Control & Prevention, USA
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Helen GunterThe BASE Facility, The University of Queensland, Australia
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Jessica AndersonSenior Field Applications Scientist, Oxford Nanopore Technologies
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Justin BeckerDana-Farber Cancer Institute & Massachusetts General Hospital, USA
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Jade BartoloAssociate Director, Automation, Oxford Nanopore Technologies
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Jack ColicchioSound Agriculture, USA
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Julie CollensVP, Commercial Operations AMR, Oxford Nanopore Technologies
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Jimmy CreithField Applications Scientist, Bioinformatics, Oxford Nanopore Technologies
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J. (Gus) GustafsonUniversity of Washington, USA
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Julie HaendigesU.S. Food and Drug Administration, USA
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Karine ChoquetUniversity of Sherbrooke, Canada
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Keith ConnollyModalis Therapeutics, USA
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Kamil KhanipovThe University of Texas Medical Branch, USA
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Katherine LawrenceMachine Learning and Bioinformatics Manager, Oxford Nanopore Technologies
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Lucia DaxingerLeiden University Medical Center, Netherlands
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Lantana GrubVanderbilt University, USA
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Lakmal JayasingheSenior VP, R&D Biologics, Oxford Nanopore Technologies
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Laura KamenetzkyCONICET, Argentina
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Logan MulroneyEMBL-EBI, UK & IIT, Italy
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Matthew BainbridgeRady Children's Institute for Genomic Medicine, USA
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Michael DeanNational Cancer Institute, USA
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Mathilde FilserCurie Institute, France
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Megan L. NoonanWashington University School of Medicine in St. Louis, USA
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Matt ParkerDirector, Clinical Bioinformatics Software, Oxford Nanopore Technologies
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Mile SikicGenome Institute of Singapore, A*STAR, Singapore
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Mike VellaSenior Director, Machine Learning, Oxford Nanopore Technologies
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Philipp ReschenederSenior Director, Applications Bioinformatics, Oxford Nanopore Technologies
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Paula SaffieClinica Santa María, Chile
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Ranjith AnandeGenesis, USA
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Rachel O’NeillUniversity of Connecticut, USA
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Rachel RubinsteinTechnical Product Manager, Software, Oxford Nanopore Technologies
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Rosemary Sinclair DokosSenior VP, Product and Programme Management, Oxford Nanopore Technologies
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Radhakrishna TirumalaiMerck & Co., USA
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Rhydian WindsorResearch Scientist, Machine Learning, Oxford Nanopore Technologies
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Stacy L. SpringsMIT Center for Biomedical Innovation, USA
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Stephanie AbernathyVice President, Sales, Americas, Oxford Nanopore Technologies
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Stephanie ChrysanthouMemorial Sloan Kettering Cancer Center, USA
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Scott HickeyDirector, Commercial Applications, Oxford Nanopore Technologies
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Shilpa KobrenHarvard Medical School, USA
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Serge MonpoehoRegeneron Pharmaceuticals, USA
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Svetlana MadjunkovaCReATe Fertility Centre, Canada
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Sean McKenzieAssociate Director, Genomic Applications Bioinformatics, Oxford Nanopore Technologies
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Samuel ShelburneThe University of Texas MD Anderson Cancer Center, USA
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Sebastian B. TeitzveryTeitz Consulting, Germany
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Thomas GarciaBaylor College of Medicine, USA
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Tasos GogakosArena BioWorks & Massachusetts General Hospital, USA
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Tim WalkerApplied Industrial Support Specialist, Oxford Nanopore Technologies
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Oxford Nanopore Technologies
David Yarmosh
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- Job title
- Institution
- ATCC, USA
- Biography
David Yarmosh is a lead bioinformatician in the ATCC Sequencing and Bioinformatics Center. His work with Oxford Nanopore Technologies data began with real-time metagenomic sequencing analysis, researching a method to identify organisms within 24 hours of sampling in a field-forward setting. He built a small toolkit that took advantage of the MinION streaming output to produce taxonomic identification as reads were generated. He has since published broadscale interplatform SARS-COV-2 variant determination and reference-grade hybrid microbial assembly. His interests lie in identifying limitations within data, hardware, and software and finding optimizations that suit the constraints of projects, budgets, and time.
- Recent publications
Yarmosh, D. A. et al. Comparative Analysis and Data Provenance for 1,113 Bacterial Genome Assemblies. mSphere 29;7(3) (2022).
DOI: 10.1128/msphere.00077-22